Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 SNX18-202ENST00000343017 3140 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMAD6O43541 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 MST1P2-201ENST00000457982 2291 ntBASIC14.44□□□□□ -0.1
SMAD6O43541 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMAD6O43541 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 MIR645-201ENST00000385283 94 ntBASIC14.44□□□□□ -0.1
SMAD6O43541 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 FGFR3P1-201ENST00000449999 601 ntBASIC14.44□□□□□ -0.1
SMAD6O43541 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.44□□□□□ -0.1
SMAD6O43541 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.44□□□□□ -0.1
SMAD6O43541 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SMAD6O43541 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.44□□□□□ -0.1
SMAD6O43541 MIR4522-201ENST00000584932 87 ntBASIC14.44□□□□□ -0.1
SMAD6O43541 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.44□□□□□ -0.1
SMAD6O43541 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SMAD6O43541 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 HSPA7-201ENST00000445535 1927 ntBASIC14.44□□□□□ -0.1
SMAD6O43541 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.44□□□□□ -0.1
SMAD6O43541 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
SMAD6O43541 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMAD6O43541 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 AC103592.1-201ENST00000394513 664 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.43□□□□□ -0.1
SMAD6O43541 FTH1P22-201ENST00000456305 520 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 AC005740.1-201ENST00000515639 522 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.43□□□□□ -0.1
SMAD6O43541 AC051619.9-201ENST00000623237 597 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 AL353726.2-201ENST00000623259 884 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 AL591122.2-201ENST00000624125 1853 ntBASIC14.43□□□□□ -0.1
SMAD6O43541 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMAD6O43541 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SMAD6O43541 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SMAD6O43541 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms