Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.23■□□□□ 0.51
CHL1O00533 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHL1O00533 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 FXNP2-201ENST00000411625 547 ntBASIC18.23■□□□□ 0.51
CHL1O00533 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.23■□□□□ 0.51
CHL1O00533 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.23■□□□□ 0.51
CHL1O00533 AC145285.5-201ENST00000562217 361 ntBASIC18.23■□□□□ 0.51
CHL1O00533 MIR4265-201ENST00000582152 99 ntBASIC18.23■□□□□ 0.51
CHL1O00533 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.23■□□□□ 0.51
CHL1O00533 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.23■□□□□ 0.51
CHL1O00533 AC091769.1-201ENST00000619576 568 ntBASIC18.23■□□□□ 0.51
CHL1O00533 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHL1O00533 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.23■□□□□ 0.51
CHL1O00533 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHL1O00533 PDXDC2P-206ENST00000534700 1315 ntBASIC18.23■□□□□ 0.51
CHL1O00533 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.22■□□□□ 0.51
CHL1O00533 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.22■□□□□ 0.51
CHL1O00533 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 AC004554.1-201ENST00000422830 1468 ntBASIC18.22■□□□□ 0.51
CHL1O00533 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
CHL1O00533 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.22■□□□□ 0.51
CHL1O00533 RPSAP31-201ENST00000416648 895 ntBASIC18.22■□□□□ 0.51
CHL1O00533 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.22■□□□□ 0.51
CHL1O00533 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.22■□□□□ 0.51
CHL1O00533 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.22■□□□□ 0.51
CHL1O00533 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.22■□□□□ 0.51
CHL1O00533 RPL18AP3-201ENST00000462885 528 ntBASIC18.22■□□□□ 0.51
CHL1O00533 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CHL1O00533 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.22■□□□□ 0.51
CHL1O00533 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.22■□□□□ 0.51
CHL1O00533 NPM1P43-201ENST00000558669 786 ntBASIC18.22■□□□□ 0.51
CHL1O00533 AC135983.4-201ENST00000564116 1262 ntBASIC18.22■□□□□ 0.51
CHL1O00533 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 RN7SL555P-201ENST00000584742 339 ntBASIC18.22■□□□□ 0.51
CHL1O00533 AC005618.3-201ENST00000624928 458 ntBASIC18.22■□□□□ 0.51
CHL1O00533 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 AL928921.2-201ENST00000641325 2442 ntBASIC18.22■□□□□ 0.51
CHL1O00533 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHL1O00533 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.22■□□□□ 0.51
CHL1O00533 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHL1O00533 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.21■□□□□ 0.51
CHL1O00533 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CHL1O00533 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.21■□□□□ 0.51
CHL1O00533 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CHL1O00533 AC019109.1-201ENST00000401725 1874 ntBASIC18.21■□□□□ 0.51
CHL1O00533 AC068587.6-202ENST00000641839 5619 ntBASIC18.21■□□□□ 0.51
CHL1O00533 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.21■□□□□ 0.51
CHL1O00533 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.21■□□□□ 0.51
CHL1O00533 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.21■□□□□ 0.51
CHL1O00533 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 HERC2P11-201ENST00000562845 725 ntBASIC18.21■□□□□ 0.51
CHL1O00533 AC100756.2-201ENST00000569537 736 ntBASIC18.21■□□□□ 0.51
CHL1O00533 AC087392.5-201ENST00000612517 489 ntBASIC18.21■□□□□ 0.51
CHL1O00533 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
CHL1O00533 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHL1O00533 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms