Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AL391647.1-201ENST00000395664 511 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC099336.1-201ENST00000417053 1171 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 CSF2RBP1-201ENST00000447905 391 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 BNIP3P42-201ENST00000454982 569 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 BNIP3P29-201ENST00000598302 571 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC011447.5-201ENST00000616168 564 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC132938.4-201ENST00000623835 848 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 MARK2P9-201ENST00000430958 1727 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AP002761.4-201ENST00000565433 3361 ntBASIC13.07□□□□□ -0.32
TMEM129A0AVI4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM129A0AVI4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AL365181.3-201ENST00000605886 3222 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 MKRN5P-201ENST00000445263 1467 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AL031595.1-201ENST00000623969 4709 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 C2orf27AP3-201ENST00000434123 579 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 KRT90P-201ENST00000549264 1064 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AL354718.3-201ENST00000616414 581 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CR382287.1-201ENST00000623954 586 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 AC009474.1-201ENST00000455096 1565 ntBASIC13.06□□□□□ -0.32
TMEM129A0AVI4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM129A0AVI4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM129A0AVI4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms