Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 BX679664.3-201ENST00000414070 555 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AQP7P5-201ENST00000428759 1049 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AL161932.2-201ENST00000435436 679 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AQP7P4-201ENST00000447083 1042 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 GRPEL2P1-201ENST00000453145 339 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AQP7P2-201ENST00000453967 1041 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AC113935.1-201ENST00000471722 555 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 RN7SL564P-201ENST00000496309 250 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AP005264.5-201ENST00000590066 467 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MIR6746-201ENST00000620971 63 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 AQP7P3-201ENST00000624547 1041 ntBASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC187A0A096LP49 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC025183.3-201ENST00000623526 1482 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 RNVU1-8-201ENST00000364272 125 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 LINC00265-2P-201ENST00000413372 782 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 KRT8P2-201ENST00000556193 944 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 SNORD3B-1-201ENST00000577988 758 ntBASIC13.55□□□□□ -0.24
CCDC187A0A096LP49 AC010976.2-201ENST00000609697 852 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms