Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIP2Q9UDT6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 FGFR3P5-201ENST00000564496 886 ntBASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AL157813.1-201ENST00000612996 587 ntBASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 AC015802.1-201ENST00000588104 1449 ntBASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 KRT8P21-201ENST00000430398 1491 ntBASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIP2Q9UDT6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 AL354702.1-201ENST00000442006 1960 ntBASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 XBP1P1-201ENST00000436573 652 ntBASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 RNA5SP423-201ENST00000517127 109 ntBASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 AC018629.1-201ENST00000623381 1736 ntBASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CLIP2Q9UDT6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIP2Q9UDT6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIP2Q9UDT6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLIP2Q9UDT6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIP2Q9UDT6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms