Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 HERC2P9-206ENST00000529624 5187 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC130686.1-201ENST00000622936 2466 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC073548.1-201ENST00000624088 1882 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 RNU1-114P-201ENST00000365297 166 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC098614.1-201ENST00000368528 745 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC093813.1-201ENST00000605066 256 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC093525.8-201ENST00000624099 1342 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 AC097359.2-201ENST00000604992 2389 ntBASIC12.79□□□□□ -0.36
DUX4Q9UBX2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 NME2P1-201ENST00000426182 414 ntBASIC12.78□□□□□ -0.36
DUX4Q9UBX2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AL162726.2-201ENST00000438986 1017 ntBASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 MIR5189-201ENST00000577370 114 ntBASIC12.78□□□□□ -0.36
DUX4Q9UBX2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DUX4Q9UBX2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms