Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 GUSBP10-201ENST00000417412 665 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 AQP7P5-201ENST00000428759 1049 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 AQP7P4-201ENST00000447083 1042 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AQP7P2-201ENST00000453967 1041 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AQP7P3-201ENST00000624547 1041 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AHCYP4-201ENST00000419201 1315 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 AC117489.1-201ENST00000625169 3217 ntBASIC19.41■□□□□ 0.7
USP35Q9P2H5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP35Q9P2H5 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.41■□□□□ 0.7
USP35Q9P2H5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 AC012073.1-201ENST00000606114 1108 ntBASIC19.4■□□□□ 0.7
USP35Q9P2H5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP35Q9P2H5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP35Q9P2H5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP35Q9P2H5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP35Q9P2H5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP35Q9P2H5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC19.39■□□□□ 0.7
USP35Q9P2H5 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.39■□□□□ 0.7
USP35Q9P2H5 CICP20-201ENST00000443330 2801 ntBASIC19.39■□□□□ 0.7
USP35Q9P2H5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP35Q9P2H5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP35Q9P2H5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP35Q9P2H5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP35Q9P2H5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP35Q9P2H5 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms