Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 NAA10-205ENST00000393712 908 ntTSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 RBP1-206ENST00000617459 667 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC232323.1-201ENST00000540724 2099 ntBASIC12.97□□□□□ -0.33
CHD8Q9HCK8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 RPL13AP5-201ENST00000439189 612 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 HLA-W-207ENST00000439514 771 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 RPL3P9-201ENST00000463217 1183 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 TPI1P2-201ENST00000491343 752 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 MIR2277-201ENST00000515916 93 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 CCT8L1P-201ENST00000465400 1674 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 AL139424.2-202ENST00000641335 1369 ntBASIC12.96□□□□□ -0.33
CHD8Q9HCK8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.96□□□□□ -0.33
CHD8Q9HCK8 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 MESTP4-201ENST00000412333 1204 ntBASIC12.96□□□□□ -0.34
CHD8Q9HCK8 AP001331.1-201ENST00000413008 1015 ntBASIC12.96□□□□□ -0.34
CHD8Q9HCK8 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 AC015688.4-201ENST00000580780 1647 ntBASIC12.96□□□□□ -0.34
CHD8Q9HCK8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHD8Q9HCK8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 PCDHA12-202ENST00000613593 2588 ntBASIC12.95□□□□□ -0.34
CHD8Q9HCK8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC12.95□□□□□ -0.34
CHD8Q9HCK8 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms