Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 CLUHP2-201ENST00000426660 1303 ntBASIC13.22□□□□□ -0.29
SNX18Q96RF0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 AC012441.1-201ENST00000446669 685 ntBASIC13.22□□□□□ -0.29
SNX18Q96RF0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 FTLP10-202ENST00000505798 471 ntBASIC13.22□□□□□ -0.29
SNX18Q96RF0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 AC138466.3-201ENST00000619983 221 ntBASIC13.22□□□□□ -0.29
SNX18Q96RF0 ENPP7P14-201ENST00000621765 1040 ntBASIC13.22□□□□□ -0.29
SNX18Q96RF0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 AP002761.4-201ENST00000565433 3361 ntBASIC13.22□□□□□ -0.29
SNX18Q96RF0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNX18Q96RF0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SNX18Q96RF0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 AL590440.2-201ENST00000641973 1595 ntBASIC13.21□□□□□ -0.29
SNX18Q96RF0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 ACTG1P3-201ENST00000431775 1114 ntBASIC13.21□□□□□ -0.29
SNX18Q96RF0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 AC106886.1-201ENST00000568660 600 ntBASIC13.21□□□□□ -0.29
SNX18Q96RF0 AC010319.3-201ENST00000597028 470 ntBASIC13.21□□□□□ -0.29
SNX18Q96RF0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.21□□□□□ -0.29
SNX18Q96RF0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNX18Q96RF0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.21□□□□□ -0.29
SNX18Q96RF0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.21□□□□□ -0.3
SNX18Q96RF0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNX18Q96RF0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.21□□□□□ -0.3
SNX18Q96RF0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNX18Q96RF0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.21□□□□□ -0.3
SNX18Q96RF0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SNX18Q96RF0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms