Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 FAM8A2P-201ENST00000528813 1142 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 BNIP3P29-201ENST00000598302 571 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AC011447.5-201ENST00000616168 564 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 AC092299.1-201ENST00000632679 757 ntBASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDLIM5Q96HC4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AC061965.1-201ENST00000560524 1465 ntBASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 LINC01815-202ENST00000641468 1409 ntBASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 OR8S1-201ENST00000310194 1080 ntBASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AC007663.3-201ENST00000609632 465 ntBASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AL136295.7-201ENST00000619226 1200 ntBASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 DGCR9-201ENST00000609630 2415 ntBASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM5Q96HC4 TCAF1P1-201ENST00000414990 2232 ntBASIC14□□□□□ -0.17
PDLIM5Q96HC4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 DPM3-202ENST00000368399 517 ntBASIC14□□□□□ -0.17
PDLIM5Q96HC4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 GOLGA2P8-201ENST00000505201 779 ntBASIC14□□□□□ -0.17
PDLIM5Q96HC4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM5Q96HC4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14□□□□□ -0.17
PDLIM5Q96HC4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms