Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 HMGN1P19-201ENST00000436976 333 ntBASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 RN7SL713P-201ENST00000582127 302 ntBASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AL359183.1-201ENST00000623796 2132 ntBASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AC015909.5-201ENST00000624336 2266 ntBASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AL122018.1-201ENST00000446607 2310 ntBASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AL512384.1-201ENST00000406683 331 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 MIR1202-201ENST00000408529 83 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AC016694.1-201ENST00000434179 700 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 KRT90P-201ENST00000549264 1064 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AC006453.4-201ENST00000636949 1252 ntBASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CLHC1Q8NHS4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms