Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 AJ011931.1-201ENST00000618749 2492 ntBASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 SPTLC1P3-201ENST00000403408 259 ntBASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 TULP3P1-202ENST00000453253 1291 ntBASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 NEMF-210ENST00000556672 590 ntTSL 2 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL22A1Q8NFW1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 AC093462.1-201ENST00000621167 1683 ntBASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 CLK2P1-201ENST00000416636 1294 ntBASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 AC006486.2-201ENST00000624246 2199 ntBASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.32■□□□□ 0.52
COL22A1Q8NFW1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 BX640514.1-201ENST00000583223 1918 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC005011.1-201ENST00000455206 210 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 RN7SL76P-201ENST00000482435 289 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC099795.2-201ENST00000639582 440 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 TMEM256P1-201ENST00000430550 340 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 AC139143.1-201ENST00000441772 1207 ntBASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL22A1Q8NFW1 RN7SL789P-201ENST00000478944 293 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms