Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 AL603832.2-201ENST00000566195 2125 ntBASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 NDUFB10P1-201ENST00000567319 521 ntBASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 SHMT1P1-201ENST00000419974 1312 ntBASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 AL008638.4-201ENST00000624792 1315 ntBASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CCDC168Q8NDH2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.51
CCDC168Q8NDH2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
CCDC168Q8NDH2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CCDC168Q8NDH2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
CCDC168Q8NDH2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CCDC168Q8NDH2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CCDC168Q8NDH2 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 MIR1226-201ENST00000408658 75 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AC006987.1-201ENST00000413610 527 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AL136982.5-201ENST00000605222 294 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 BX322534.1-201ENST00000635574 241 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AC215524.1-201ENST00000635696 241 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AC132872.4-202ENST00000622924 2756 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 HNRNPABP1-201ENST00000406003 734 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AC026884.1-201ENST00000418296 457 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 HMGA1P2-201ENST00000430198 324 ntBASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC168Q8NDH2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 FAM86JP-202ENST00000484500 988 ntBASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 TPST2P1-201ENST00000564073 1102 ntBASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC168Q8NDH2 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms