Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC091804.1-201ENST00000486888 567 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AL136295.7-201ENST00000619226 1200 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AC092299.1-201ENST00000632679 757 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 AL356585.2-201ENST00000625078 2396 ntBASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.51□□□□□ -0.09
LYSMD3Q7Z3D4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 PGAM1P5-201ENST00000548011 764 ntBASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 TCAF1P1-201ENST00000414990 2232 ntBASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LYSMD3Q7Z3D4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC067750.1-201ENST00000608826 6545 ntBASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC078875.1-201ENST00000431907 724 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms