Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 AC012508.2-201ENST00000567613 1472 ntBASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 NCLP1-201ENST00000445357 1963 ntBASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC005014.1-201ENST00000432006 2976 ntBASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 INTS4P2-202ENST00000614726 2019 ntBASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC099548.2-209ENST00000480264 625 ntBASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AL157996.1-201ENST00000624684 2299 ntBASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXR1Q6PIV2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 PCDHB19P-202ENST00000625133 2914 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 C1QBPP1-201ENST00000400117 770 ntBASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXR1Q6PIV2 KRT18P64-201ENST00000434946 1219 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms