Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 RARRES2P8-201ENST00000566335 367 ntBASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 AC106730.1-201ENST00000566722 1090 ntBASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 AC140113.2-201ENST00000604370 208 ntBASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 GHET1-201ENST00000627071 1906 ntBASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 FAM90A11P-201ENST00000518378 2218 ntBASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AC102953.2-201ENST00000609755 3026 ntBASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 KRT18P58-201ENST00000527480 1120 ntBASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
KCNIP4Q6PIL6 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 PCDHB19P-202ENST00000625133 2914 ntBASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.21□□□□□ -0.62
KCNIP4Q6PIL6 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.2□□□□□ -0.62
KCNIP4Q6PIL6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KCNIP4Q6PIL6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.2□□□□□ -0.62
KCNIP4Q6PIL6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KCNIP4Q6PIL6 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms