Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 NAA38-204ENST00000575208 529 ntTSL 3 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AC011477.7-201ENST00000617163 1440 ntBASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AL137244.1-201ENST00000422931 865 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AL356740.1-201ENST00000602192 1297 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 NEK4P3-201ENST00000604859 544 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 CR392039.1-201ENST00000623217 204 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 DDC-213ENST00000617822 1809 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 PTN-202ENST00000393083 1599 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AL050341.2-201ENST00000567508 1541 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AIG1-203ENST00000367596 559 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 RN7SL605P-201ENST00000577229 281 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 FTLP5-201ENST00000586853 534 ntBASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPAQ5VT25 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 WASH7P-201ENST00000488147 1351 ntBASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 MIR3940-201ENST00000579148 102 ntBASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDC42BPAQ5VT25 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 CCND3P1-201ENST00000438347 580 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 RPL29P2-201ENST00000488409 460 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 NDUFB2P1-201ENST00000506966 295 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AC233724.9-201ENST00000511694 407 ntBASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDC42BPAQ5VT25 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms