Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ZNF767P-206ENST00000513792 565 ntBASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 MIR6869-201ENST00000619434 62 ntBASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 LINC00115-201ENST00000473798 1317 ntBASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 KRT18P15-201ENST00000458108 1291 ntBASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 MIR600HG-201ENST00000449175 5984 ntBASIC15.1■□□□□ 0.01
PTPN20Q4JDL3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN20Q4JDL3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms