Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 AGAP10P-201ENST00000454844 2418 ntBASIC15□□□□□ -0.01
CDH6P55285 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15□□□□□ -0.01
CDH6P55285 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH6P55285 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
CDH6P55285 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15□□□□□ -0.01
CDH6P55285 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15□□□□□ -0.01
CDH6P55285 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH6P55285 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15□□□□□ -0.01
CDH6P55285 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15□□□□□ -0.01
CDH6P55285 AC144522.1-201ENST00000625111 1658 ntBASIC15□□□□□ -0.01
CDH6P55285 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15□□□□□ -0.01
CDH6P55285 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15□□□□□ -0.01
CDH6P55285 AC023794.5-201ENST00000564380 2157 ntBASIC15□□□□□ -0.01
CDH6P55285 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH6P55285 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 AC104581.4-201ENST00000623126 3052 ntBASIC14.99□□□□□ -0.01
CDH6P55285 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 AC130686.1-201ENST00000622936 2466 ntBASIC14.99□□□□□ -0.01
CDH6P55285 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 MTX1P1-201ENST00000440904 838 ntBASIC14.99□□□□□ -0.01
CDH6P55285 HSPB1P2-201ENST00000448722 546 ntBASIC14.99□□□□□ -0.01
CDH6P55285 BNIP3P42-201ENST00000454982 569 ntBASIC14.99□□□□□ -0.01
CDH6P55285 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH6P55285 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH6P55285 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH6P55285 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 AC124068.2-201ENST00000569473 1109 ntBASIC14.99□□□□□ -0.01
CDH6P55285 BNIP3P29-201ENST00000598302 571 ntBASIC14.99□□□□□ -0.01
CDH6P55285 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH6P55285 AC011447.5-201ENST00000616168 564 ntBASIC14.99□□□□□ -0.01
CDH6P55285 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH6P55285 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CDH6P55285 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH6P55285 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH6P55285 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH6P55285 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH6P55285 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.98□□□□□ -0.01
CDH6P55285 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 AC087386.2-201ENST00000623212 4637 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms