Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 ABR-201ENST00000291107 2673 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-5P52952 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-5P52952 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AC113347.1-201ENST00000413321 391 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AL596275.1-201ENST00000423464 877 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 KRT17P6-201ENST00000453795 1220 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 AC092647.4-201ENST00000457211 535 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 AC109635.5-201ENST00000533593 962 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 SAMD11P1-201ENST00000571429 661 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AL009183.1-201ENST00000603760 355 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 AC069148.1-201ENST00000608741 768 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NKX2-5P52952 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-5P52952 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-5P52952 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.19□□□□□ -0.46
NKX2-5P52952 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX2-5P52952 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NKX2-5P52952 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX2-5P52952 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX2-5P52952 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-5P52952 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 TERF1P1-201ENST00000311003 1181 ntBASIC12.18□□□□□ -0.46
NKX2-5P52952 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.18□□□□□ -0.46
NKX2-5P52952 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NKX2-5P52952 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.18□□□□□ -0.46
NKX2-5P52952 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 RNF152P1-201ENST00000397754 604 ntBASIC12.18□□□□□ -0.46
NKX2-5P52952 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-5P52952 TSPY5P-201ENST00000426936 936 ntBASIC12.18□□□□□ -0.46
NKX2-5P52952 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 FAM185BP-201ENST00000443595 716 ntBASIC12.18□□□□□ -0.46
NKX2-5P52952 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-5P52952 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NKX2-5P52952 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-5P52952 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.18□□□□□ -0.46
NKX2-5P52952 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.18□□□□□ -0.46
NKX2-5P52952 Z69720.1-201ENST00000601483 472 ntBASIC12.18□□□□□ -0.46
NKX2-5P52952 AL139288.1-201ENST00000623748 933 ntBASIC12.18□□□□□ -0.46
NKX2-5P52952 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NKX2-5P52952 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms