Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 AC004899.2-201ENST00000622993 3860 ntBASIC12.74□□□□□ -0.37
CCR9P51686 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 AL138709.1-201ENST00000614840 1693 ntBASIC12.74□□□□□ -0.37
CCR9P51686 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 BAATP1-201ENST00000412284 1225 ntBASIC12.74□□□□□ -0.37
CCR9P51686 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.74□□□□□ -0.37
CCR9P51686 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 INGX-202ENST00000489074 768 ntBASIC12.74□□□□□ -0.37
CCR9P51686 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.74□□□□□ -0.37
CCR9P51686 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.74□□□□□ -0.37
CCR9P51686 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.74□□□□□ -0.37
CCR9P51686 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 NCLP1-201ENST00000445357 1963 ntBASIC12.74□□□□□ -0.37
CCR9P51686 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.74□□□□□ -0.37
CCR9P51686 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCR9P51686 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCR9P51686 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCR9P51686 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCR9P51686 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CCR9P51686 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CCR9P51686 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.73□□□□□ -0.37
CCR9P51686 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.73□□□□□ -0.37
CCR9P51686 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CCR9P51686 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCR9P51686 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCR9P51686 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCR9P51686 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CCR9P51686 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.73□□□□□ -0.37
CCR9P51686 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.73□□□□□ -0.37
CCR9P51686 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.73□□□□□ -0.37
CCR9P51686 SERBP1P5-201ENST00000510079 1181 ntBASIC12.73□□□□□ -0.37
CCR9P51686 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCR9P51686 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.73□□□□□ -0.37
CCR9P51686 CTBP2P3-201ENST00000585629 1255 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms