Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.02■□□□□ -0
MTHFRP42898 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 PYY2-201ENST00000315776 282 ntBASIC15.02■□□□□ -0
MTHFRP42898 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.02■□□□□ -0
MTHFRP42898 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 AL135901.1-201ENST00000451812 333 ntBASIC15.02■□□□□ -0
MTHFRP42898 GNG10P1-201ENST00000452289 199 ntBASIC15.02■□□□□ -0
MTHFRP42898 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.02■□□□□ -0
MTHFRP42898 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.02■□□□□ -0
MTHFRP42898 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.02■□□□□ -0
MTHFRP42898 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 AC021016.3-201ENST00000608367 477 ntBASIC15.02■□□□□ -0
MTHFRP42898 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MTHFRP42898 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.02□□□□□ -0.01
MTHFRP42898 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
MTHFRP42898 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.02□□□□□ -0.01
MTHFRP42898 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.02□□□□□ -0.01
MTHFRP42898 OR2I1P-209ENST00000641730 5365 ntBASIC15.02□□□□□ -0.01
MTHFRP42898 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
MTHFRP42898 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MTHFRP42898 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.02□□□□□ -0.01
MTHFRP42898 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 AGAP7P-201ENST00000582299 2062 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 AGAP14-201ENST00000624701 2060 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 AC007686.3-201ENST00000619017 3487 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 OR8T1P-201ENST00000421347 918 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 KRT17P4-201ENST00000429445 819 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.01□□□□□ -0.01
MTHFRP42898 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.01□□□□□ -0.01
MTHFRP42898 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.01□□□□□ -0.01
MTHFRP42898 RNA5SP406-201ENST00000516106 112 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.01□□□□□ -0.01
MTHFRP42898 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.01□□□□□ -0.01
MTHFRP42898 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.01□□□□□ -0.01
MTHFRP42898 AL118516.1-201ENST00000564152 670 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
MTHFRP42898 MIR6746-201ENST00000620971 63 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 AC090386.2-201ENST00000623010 1039 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 LINC00244-201ENST00000625073 613 ntBASIC15.01□□□□□ -0.01
MTHFRP42898 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
MTHFRP42898 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MTHFRP42898 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.01□□□□□ -0.01
MTHFRP42898 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MTHFRP42898 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms