Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
EPHA3P29320 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.06□□□□□ -0.16
EPHA3P29320 SPTLC1P1-201ENST00000447199 261 ntBASIC14.06□□□□□ -0.16
EPHA3P29320 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.06□□□□□ -0.16
EPHA3P29320 CHCHD2P3-201ENST00000603038 451 ntBASIC14.06□□□□□ -0.16
EPHA3P29320 AC106028.4-201ENST00000614509 607 ntBASIC14.06□□□□□ -0.16
EPHA3P29320 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 AC125807.2-201ENST00000513358 3514 ntBASIC14.06□□□□□ -0.16
EPHA3P29320 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
EPHA3P29320 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
EPHA3P29320 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EPHA3P29320 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.05□□□□□ -0.16
EPHA3P29320 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.05□□□□□ -0.16
EPHA3P29320 AC005498.2-205ENST00000593218 784 ntBASIC14.05□□□□□ -0.16
EPHA3P29320 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.05□□□□□ -0.16
EPHA3P29320 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.05□□□□□ -0.16
EPHA3P29320 AC009093.10-201ENST00000641956 1442 ntBASIC14.05□□□□□ -0.16
EPHA3P29320 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EPHA3P29320 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
EPHA3P29320 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
EPHA3P29320 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 AP002761.4-201ENST00000565433 3361 ntBASIC14.04□□□□□ -0.16
EPHA3P29320 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.04□□□□□ -0.16
EPHA3P29320 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EPHA3P29320 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.04□□□□□ -0.16
EPHA3P29320 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms