Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DPA1P20036 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AC004899.1-201ENST00000424687 1714 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 BRWD1P1-201ENST00000401091 371 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 HLA-J-204ENST00000495278 958 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 RN7SL163P-201ENST00000583100 276 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AC091271.1-201ENST00000611877 1162 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 FAM90A7P-201ENST00000382628 1395 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 FAM90A23P-201ENST00000400136 1395 ntBASIC14.55□□□□□ -0.08
HLA-DPA1P20036 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPA1P20036 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 XBP1P1-201ENST00000436573 652 ntBASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AC106794.1-201ENST00000506935 792 ntBASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AC140658.4-201ENST00000561990 352 ntBASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AL136295.7-201ENST00000619226 1200 ntBASIC14.54□□□□□ -0.08
HLA-DPA1P20036 AC004923.1-202ENST00000642106 209 ntBASIC14.54□□□□□ -0.08
HLA-DPA1P20036 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPA1P20036 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms