Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC19.34■□□□□ 0.69
ATF3P18847 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ATF3P18847 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATF3P18847 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATF3P18847 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATF3P18847 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.34■□□□□ 0.69
ATF3P18847 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATF3P18847 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.34■□□□□ 0.69
ATF3P18847 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.33■□□□□ 0.69
ATF3P18847 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.33■□□□□ 0.69
ATF3P18847 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ATF3P18847 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF3P18847 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATF3P18847 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATF3P18847 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF3P18847 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
ATF3P18847 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC19.33■□□□□ 0.69
ATF3P18847 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.33■□□□□ 0.69
ATF3P18847 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATF3P18847 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.33■□□□□ 0.69
ATF3P18847 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF3P18847 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF3P18847 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC19.33■□□□□ 0.68
ATF3P18847 EEF1DP2-201ENST00000433698 843 ntBASIC19.33■□□□□ 0.68
ATF3P18847 CCND3P1-201ENST00000438347 580 ntBASIC19.33■□□□□ 0.68
ATF3P18847 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC19.33■□□□□ 0.68
ATF3P18847 RN7SL838P-201ENST00000481676 295 ntBASIC19.33■□□□□ 0.68
ATF3P18847 RN7SL523P-201ENST00000484401 298 ntBASIC19.33■□□□□ 0.68
ATF3P18847 AC112250.1-201ENST00000504640 745 ntBASIC19.33■□□□□ 0.68
ATF3P18847 AC090820.1-201ENST00000519722 591 ntBASIC19.33■□□□□ 0.68
ATF3P18847 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC19.33■□□□□ 0.68
ATF3P18847 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC19.33■□□□□ 0.68
ATF3P18847 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC19.33■□□□□ 0.68
ATF3P18847 AL450487.2-201ENST00000615934 407 ntBASIC19.33■□□□□ 0.68
ATF3P18847 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 MEP1AP1-201ENST00000636082 1097 ntBASIC19.33■□□□□ 0.68
ATF3P18847 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
ATF3P18847 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF3P18847 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC19.33■□□□□ 0.68
ATF3P18847 AC018442.1-201ENST00000421439 2061 ntBASIC19.32■□□□□ 0.68
ATF3P18847 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ATF3P18847 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.32■□□□□ 0.68
ATF3P18847 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 AC006328.1-201ENST00000437571 379 ntBASIC19.32■□□□□ 0.68
ATF3P18847 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
ATF3P18847 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.32■□□□□ 0.68
ATF3P18847 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.32■□□□□ 0.68
ATF3P18847 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF3P18847 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATF3P18847 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATF3P18847 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATF3P18847 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATF3P18847 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.31■□□□□ 0.68
ATF3P18847 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF3P18847 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.31■□□□□ 0.68
ATF3P18847 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATF3P18847 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms