Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ATF1P18846 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATF1P18846 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ATF1P18846 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.69□□□□□ -0.38
ATF1P18846 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 AL022313.4-201ENST00000562756 2046 ntBASIC12.69□□□□□ -0.38
ATF1P18846 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 MARK2P9-201ENST00000430958 1727 ntBASIC12.69□□□□□ -0.38
ATF1P18846 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ATF1P18846 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.69□□□□□ -0.38
ATF1P18846 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 FTLP10-202ENST00000505798 471 ntBASIC12.69□□□□□ -0.38
ATF1P18846 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.69□□□□□ -0.38
ATF1P18846 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.69□□□□□ -0.38
ATF1P18846 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 BX088702.1-201ENST00000610784 235 ntBASIC12.69□□□□□ -0.38
ATF1P18846 AC145423.3-201ENST00000615987 467 ntBASIC12.69□□□□□ -0.38
ATF1P18846 AL033527.5-201ENST00000641382 801 ntBASIC12.69□□□□□ -0.38
ATF1P18846 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATF1P18846 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ATF1P18846 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.69□□□□□ -0.38
ATF1P18846 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.68□□□□□ -0.38
ATF1P18846 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ATF1P18846 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 AP000437.1-201ENST00000624057 2085 ntBASIC12.68□□□□□ -0.38
ATF1P18846 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 AC020910.5-201ENST00000623668 1865 ntBASIC12.68□□□□□ -0.38
ATF1P18846 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.68□□□□□ -0.38
ATF1P18846 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.68□□□□□ -0.38
ATF1P18846 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.68□□□□□ -0.38
ATF1P18846 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.68□□□□□ -0.38
ATF1P18846 AC140912.1-201ENST00000577171 1054 ntBASIC12.68□□□□□ -0.38
ATF1P18846 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.68□□□□□ -0.38
ATF1P18846 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.68□□□□□ -0.38
ATF1P18846 BAP1-211ENST00000615113 489 ntBASIC12.68□□□□□ -0.38
ATF1P18846 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATF1P18846 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.68□□□□□ -0.38
ATF1P18846 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms