Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL6A2P12110 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL6A2P12110 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL6A2P12110 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.27□□□□□ -0.13
COL6A2P12110 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL6A2P12110 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
COL6A2P12110 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
COL6A2P12110 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.27□□□□□ -0.13
COL6A2P12110 AL928654.5-201ENST00000624831 2501 ntBASIC14.26□□□□□ -0.13
COL6A2P12110 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL6A2P12110 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 ST13P19-201ENST00000442505 1124 ntBASIC14.26□□□□□ -0.13
COL6A2P12110 CHMP1AP1-201ENST00000445563 662 ntBASIC14.26□□□□□ -0.13
COL6A2P12110 CRB3P1-201ENST00000449338 276 ntBASIC14.26□□□□□ -0.13
COL6A2P12110 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 INE1-201ENST00000456273 945 ntBASIC14.26□□□□□ -0.13
COL6A2P12110 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL6A2P12110 AL591163.1-201ENST00000641757 987 ntBASIC14.26□□□□□ -0.13
COL6A2P12110 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL6A2P12110 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.26□□□□□ -0.13
COL6A2P12110 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL6A2P12110 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 TMBIM7P-202ENST00000641474 1516 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.25□□□□□ -0.13
COL6A2P12110 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
COL6A2P12110 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.25□□□□□ -0.13
COL6A2P12110 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 AC006001.1-201ENST00000325130 474 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
COL6A2P12110 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.25□□□□□ -0.13
COL6A2P12110 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.25□□□□□ -0.13
COL6A2P12110 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL6A2P12110 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
COL6A2P12110 RN7SL837P-201ENST00000463010 287 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 USP32P1-208ENST00000506594 1164 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.25□□□□□ -0.13
COL6A2P12110 AC233724.13-201ENST00000598383 410 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 AL136301.1-201ENST00000615830 422 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 CR392039.2-201ENST00000623182 509 ntBASIC14.25□□□□□ -0.13
COL6A2P12110 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL6A2P12110 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.25□□□□□ -0.13
COL6A2P12110 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL6A2P12110 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms