Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 RPL17P11-201ENST00000417593 544 ntBASIC11.3□□□□□ -0.6
CD28P10747 AC098935.1-201ENST00000446057 611 ntBASIC11.3□□□□□ -0.6
CD28P10747 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.3□□□□□ -0.6
CD28P10747 AC003686.1-201ENST00000550956 1034 ntBASIC11.3□□□□□ -0.6
CD28P10747 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
CD28P10747 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC11.3□□□□□ -0.6
CD28P10747 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 HPN-206ENST00000597419 1212 ntTSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 AL731571.1-201ENST00000617058 5428 ntBASIC11.3□□□□□ -0.6
CD28P10747 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 AC074138.1-201ENST00000611182 1303 ntBASIC11.3□□□□□ -0.6
CD28P10747 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CD28P10747 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.29□□□□□ -0.6
CD28P10747 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 LINC00528-201ENST00000600723 2160 ntBASIC11.29□□□□□ -0.6
CD28P10747 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 AL512430.1-201ENST00000392575 860 ntBASIC11.29□□□□□ -0.6
CD28P10747 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 BANF1P3-201ENST00000412556 261 ntBASIC11.29□□□□□ -0.6
CD28P10747 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC11.29□□□□□ -0.6
CD28P10747 RPS9P1-201ENST00000419943 583 ntBASIC11.29□□□□□ -0.6
CD28P10747 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 AC078991.1-201ENST00000437297 610 ntBASIC11.29□□□□□ -0.6
CD28P10747 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.29□□□□□ -0.6
CD28P10747 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 AC124068.2-201ENST00000569473 1109 ntBASIC11.29□□□□□ -0.6
CD28P10747 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 AC092171.5-201ENST00000608012 942 ntBASIC11.29□□□□□ -0.6
CD28P10747 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC11.29□□□□□ -0.6
CD28P10747 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.29□□□□□ -0.6
CD28P10747 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CD28P10747 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.29□□□□□ -0.6
CD28P10747 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CD28P10747 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms