Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SFTPBP07988 AC099521.3-201ENST00000624251 2938 ntBASIC12.65□□□□□ -0.39
SFTPBP07988 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SFTPBP07988 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.64□□□□□ -0.39
SFTPBP07988 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 MYADML-201ENST00000474610 2147 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 AC005229.1-201ENST00000392885 409 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SFTPBP07988 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 AC007274.1-201ENST00000439805 662 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 AC012441.1-201ENST00000446669 685 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.64□□□□□ -0.39
SFTPBP07988 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 AC022137.2-201ENST00000503482 481 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 AC106760.1-201ENST00000508690 800 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SFTPBP07988 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.64□□□□□ -0.39
SFTPBP07988 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.64□□□□□ -0.39
SFTPBP07988 MIR6775-201ENST00000617557 69 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.64□□□□□ -0.39
SFTPBP07988 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SFTPBP07988 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.64□□□□□ -0.39
SFTPBP07988 AC027612.1-201ENST00000445234 2395 ntBASIC12.64□□□□□ -0.39
SFTPBP07988 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SFTPBP07988 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
SFTPBP07988 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.64□□□□□ -0.39
SFTPBP07988 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SFTPBP07988 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 PDIA3P1-201ENST00000471856 1510 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 ANKRD19P-201ENST00000338192 862 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.63□□□□□ -0.39
SFTPBP07988 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.63□□□□□ -0.39
SFTPBP07988 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SFTPBP07988 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.63□□□□□ -0.39
SFTPBP07988 AC131206.1-201ENST00000538078 1211 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 MIR4259-201ENST00000584466 101 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 MIR6752-201ENST00000618442 71 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 AL139385.1-201ENST00000611744 3272 ntBASIC12.63□□□□□ -0.39
SFTPBP07988 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms