Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 AHCYP2-201ENST00000430630 1300 ntBASIC14.03□□□□□ -0.16
KRT6AP02538 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.03□□□□□ -0.16
KRT6AP02538 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 SHC1P1-201ENST00000425230 1745 ntBASIC14.03□□□□□ -0.16
KRT6AP02538 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.03□□□□□ -0.16
KRT6AP02538 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRT6AP02538 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KRT6AP02538 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KRT6AP02538 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.02□□□□□ -0.16
KRT6AP02538 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 AL157996.1-201ENST00000624684 2299 ntBASIC14.02□□□□□ -0.16
KRT6AP02538 AC089987.1-201ENST00000551654 2209 ntBASIC14.02□□□□□ -0.16
KRT6AP02538 AL022313.4-201ENST00000562756 2046 ntBASIC14.02□□□□□ -0.16
KRT6AP02538 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.02□□□□□ -0.16
KRT6AP02538 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
KRT6AP02538 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRT6AP02538 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
KRT6AP02538 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT6AP02538 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT6AP02538 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
KRT6AP02538 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT6AP02538 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.02□□□□□ -0.17
KRT6AP02538 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT6AP02538 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 PPY2P-201ENST00000582808 702 ntBASIC14.02□□□□□ -0.17
KRT6AP02538 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT6AP02538 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.02□□□□□ -0.17
KRT6AP02538 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.02□□□□□ -0.17
KRT6AP02538 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 AC130686.1-201ENST00000622936 2466 ntBASIC14.02□□□□□ -0.17
KRT6AP02538 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRT6AP02538 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 AC023794.5-201ENST00000564380 2157 ntBASIC14.02□□□□□ -0.17
KRT6AP02538 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
KRT6AP02538 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
KRT6AP02538 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT6AP02538 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT6AP02538 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
KRT6AP02538 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRT6AP02538 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.01□□□□□ -0.17
KRT6AP02538 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT6AP02538 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.01□□□□□ -0.17
KRT6AP02538 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.01□□□□□ -0.17
KRT6AP02538 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRT6AP02538 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms