Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 GPAA1P2-201ENST00000417923 928 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 AC099548.2-209ENST00000480264 625 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 AC020914.3-201ENST00000594712 304 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 AL805961.1-203ENST00000641078 1258 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 AC007952.5-201ENST00000572818 1486 ntBASIC15.45■□□□□ 0.06
HLA-DRAP01903 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRAP01903 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DRAP01903 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 LINC00115-201ENST00000473798 1317 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 AC011742.3-201ENST00000439053 820 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 KRT8P13-201ENST00000463294 1010 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 MIR4525-201ENST00000580000 75 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 MIR3615-201ENST00000581999 87 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 BAP1-211ENST00000615113 489 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 GPR182-203ENST00000622922 591 ntBASIC15.44■□□□□ 0.06
HLA-DRAP01903 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRAP01903 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRAP01903 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DRAP01903 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.43■□□□□ 0.06
HLA-DRAP01903 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRAP01903 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms