Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.87□□□□□ -0.35
ALX3O95076 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.87□□□□□ -0.35
ALX3O95076 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.87□□□□□ -0.35
ALX3O95076 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.87□□□□□ -0.35
ALX3O95076 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 TCAM1P-207ENST00000485295 1537 ntBASIC12.87□□□□□ -0.35
ALX3O95076 AC011840.2-201ENST00000563063 1520 ntBASIC12.87□□□□□ -0.35
ALX3O95076 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.87□□□□□ -0.35
ALX3O95076 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
ALX3O95076 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.87□□□□□ -0.35
ALX3O95076 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.87□□□□□ -0.35
ALX3O95076 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ALX3O95076 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 C1QBPP1-201ENST00000400117 770 ntBASIC12.86□□□□□ -0.35
ALX3O95076 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 MRPS18AP1-201ENST00000414458 589 ntBASIC12.86□□□□□ -0.35
ALX3O95076 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 FAM207CP-201ENST00000443486 507 ntBASIC12.86□□□□□ -0.35
ALX3O95076 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 AL512638.1-201ENST00000457493 794 ntBASIC12.86□□□□□ -0.35
ALX3O95076 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 AC026434.2-201ENST00000506094 1078 ntBASIC12.86□□□□□ -0.35
ALX3O95076 AC055876.2-201ENST00000531834 546 ntBASIC12.86□□□□□ -0.35
ALX3O95076 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.86□□□□□ -0.35
ALX3O95076 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 AP005019.2-201ENST00000615104 511 ntBASIC12.86□□□□□ -0.35
ALX3O95076 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 INE2-201ENST00000630399 1874 ntBASIC12.86□□□□□ -0.35
ALX3O95076 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 PCDHA5-203ENST00000614258 4248 ntBASIC12.86□□□□□ -0.35
ALX3O95076 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 MYADML-201ENST00000474610 2147 ntBASIC12.86□□□□□ -0.35
ALX3O95076 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ALX3O95076 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ALX3O95076 POM121L14P-201ENST00000406100 1558 ntBASIC12.86□□□□□ -0.35
ALX3O95076 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.86□□□□□ -0.35
ALX3O95076 AC092117.1-201ENST00000621230 3250 ntBASIC12.86□□□□□ -0.35
ALX3O95076 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALX3O95076 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ALX3O95076 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ALX3O95076 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALX3O95076 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ALX3O95076 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms