Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC008825.2-201ENST00000603374 718 ntBASIC15□□□□□ -0.01
CCDC188H7C350 AL691403.2-201ENST00000618460 490 ntBASIC15□□□□□ -0.01
CCDC188H7C350 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15□□□□□ -0.01
CCDC188H7C350 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CCDC188H7C350 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 AL138709.1-201ENST00000614840 1693 ntBASIC15□□□□□ -0.01
CCDC188H7C350 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC188H7C350 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15□□□□□ -0.01
CCDC188H7C350 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC188H7C350 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CCDC188H7C350 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CCDC188H7C350 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 MIR1233-2-201ENST00000408138 82 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 MIR1233-1-201ENST00000408722 82 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 AC087499.6-201ENST00000411576 835 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 CICP12-201ENST00000455801 843 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC188H7C350 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC188H7C350 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC188H7C350 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC188H7C350 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC188H7C350 AC027601.3-201ENST00000622907 509 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC188H7C350 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC188H7C350 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 PCDHB18P-202ENST00000526308 3197 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 AP000437.1-201ENST00000624057 2085 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC188H7C350 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 AL445250.1-201ENST00000641671 2259 ntBASIC14.99□□□□□ -0.01
CCDC188H7C350 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC188H7C350 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC188H7C350 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC188H7C350 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC188H7C350 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.98□□□□□ -0.01
CCDC188H7C350 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 KRT18P15-201ENST00000458108 1291 ntBASIC14.98□□□□□ -0.01
CCDC188H7C350 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC188H7C350 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC188H7C350 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC188H7C350 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms