Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AC136621.1-201ENST00000624017 2304 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AC136604.1-202ENST00000425471 771 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AC025594.1-201ENST00000469533 543 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AC147876.1-201ENST00000504408 322 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AC254633.1-201ENST00000606790 345 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 AL512324.3-201ENST00000619383 882 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZC3H4Q9UPT8 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 KRT8P18-201ENST00000413425 1445 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 STK33P1-201ENST00000423835 1218 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC011431.1-201ENST00000512971 230 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC100858.1-201ENST00000514059 1228 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AP000920.1-201ENST00000531824 344 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 PDXDC2P-206ENST00000534700 1315 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 RN7SL524P-201ENST00000581152 300 ntBASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZC3H4Q9UPT8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 PRAL-201ENST00000624952 3286 ntBASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 AC007952.5-201ENST00000572818 1486 ntBASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZC3H4Q9UPT8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms