Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 AL357563.1-201ENST00000404728 395 ntBASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 CTBP2P4-201ENST00000513884 920 ntBASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SYNPO2Q9UMS6 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 IL9RP3-201ENST00000442856 1674 ntBASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 KRT18P62-201ENST00000446618 1287 ntBASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC025186.1-201ENST00000478174 870 ntBASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC012073.1-201ENST00000606114 1108 ntBASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AL132780.4-201ENST00000624870 1135 ntBASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SYNPO2Q9UMS6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SYNPO2Q9UMS6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC073210.1-201ENST00000414799 232 ntBASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ACTG1P19-201ENST00000418987 1116 ntBASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNPO2Q9UMS6 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms