Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AC007292.2-201ENST00000593524 1812 ntBASIC14.25□□□□□ -0.13
NCDNQ9UBB6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 URB1-AS1-201ENST00000534991 831 ntBASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AC131206.1-201ENST00000538078 1211 ntBASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 REXO1L2P-201ENST00000425429 2069 ntBASIC14.25□□□□□ -0.13
NCDNQ9UBB6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AL161772.1-201ENST00000610494 4412 ntBASIC14.25□□□□□ -0.13
NCDNQ9UBB6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NCDNQ9UBB6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 AL512599.1-201ENST00000430724 685 ntBASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SCARNA12-201ENST00000459155 270 ntBASIC14.24□□□□□ -0.13
NCDNQ9UBB6 AC092612.1-201ENST00000514501 998 ntBASIC14.24□□□□□ -0.13
NCDNQ9UBB6 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.24□□□□□ -0.13
NCDNQ9UBB6 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCDNQ9UBB6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NCDNQ9UBB6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms