Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AC125807.2-201ENST00000513358 3514 ntBASIC14.22□□□□□ -0.13
MKS1Q9NXB0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 UGT1A2P-201ENST00000454886 866 ntBASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AC106760.1-201ENST00000508690 800 ntBASIC14.22□□□□□ -0.13
MKS1Q9NXB0 RNA5SP421-201ENST00000516864 134 ntBASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AC008494.3-201ENST00000606615 944 ntBASIC14.22□□□□□ -0.13
MKS1Q9NXB0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.22□□□□□ -0.13
MKS1Q9NXB0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 AL645933.1-201ENST00000440087 609 ntBASIC14.21□□□□□ -0.13
MKS1Q9NXB0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 RNA5SP486-201ENST00000515961 83 ntBASIC14.21□□□□□ -0.13
MKS1Q9NXB0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 WASH4P-201ENST00000564273 1246 ntBASIC14.21□□□□□ -0.13
MKS1Q9NXB0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 AC073413.1-201ENST00000603927 732 ntBASIC14.21□□□□□ -0.13
MKS1Q9NXB0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.21□□□□□ -0.13
MKS1Q9NXB0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.21□□□□□ -0.14
MKS1Q9NXB0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MKS1Q9NXB0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MKS1Q9NXB0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms