Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CHMP1AP1-201ENST00000445563 662 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 KLF2P4-201ENST00000451959 1225 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CROCCP4-201ENST00000457096 498 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AP000812.2-201ENST00000538934 718 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC079316.1-201ENST00000548397 411 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC132192.2-201ENST00000596206 1147 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 MIR6787-201ENST00000616675 61 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AC068587.10-201ENST00000641210 219 ntBASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NEUROD4Q9HD90 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 MIR1202-201ENST00000408529 83 ntBASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 CNN2P10-201ENST00000443067 918 ntBASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 AL022313.4-201ENST00000562756 2046 ntBASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NEUROD4Q9HD90 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms