Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 PMS2P2-201ENST00000425039 1128 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AL590640.2-201ENST00000457038 527 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC068587.3-201ENST00000526613 355 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AP003171.2-201ENST00000528208 925 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 TDH-203ENST00000531764 1110 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC005586.2-201ENST00000563946 837 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 LINC02560-201ENST00000596379 459 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 Z82170.1-201ENST00000625081 3192 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AC073869.1-201ENST00000415574 2762 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HDHD3Q9BSH5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 TPM3P8-201ENST00000330554 643 ntBASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.21□□□□□ -0.45
HDHD3Q9BSH5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms