Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AL080243.1-201ENST00000423293 1060 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 EEF1DP2-201ENST00000433698 843 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 RPL3P5-201ENST00000441645 1232 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AC092903.1-201ENST00000466506 262 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 KNOP1P1-201ENST00000542108 989 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AC027139.1-201ENST00000565286 951 ntBASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CRAMP1Q96RY5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 RN7SL147P-201ENST00000487345 298 ntBASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CRAMP1Q96RY5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CRAMP1Q96RY5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms