Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 KCND2-201ENST00000331113 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 TOMM22P5-201ENST00000416399 439 ntBASIC10.99□□□□□ -0.65
AP1S3Q96PC3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 SPDYE14P-201ENST00000442619 822 ntBASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AC105339.1-204ENST00000636249 355 ntBASIC10.99□□□□□ -0.65
AP1S3Q96PC3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AC011700.1-201ENST00000610409 2627 ntBASIC10.99□□□□□ -0.65
AP1S3Q96PC3 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 ALG1L5P-201ENST00000482043 771 ntBASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC023090.2-201ENST00000625182 2110 ntBASIC10.98□□□□□ -0.65
AP1S3Q96PC3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AP1S3Q96PC3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms