Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MKRN5P-201ENST00000445263 1467 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 MIR943-201ENST00000401286 94 ntBASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 PUDPP3-201ENST00000445368 636 ntBASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 FAM86GP-201ENST00000448322 971 ntBASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 ALG3P1-201ENST00000508806 1114 ntBASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 AC104506.1-201ENST00000609247 429 ntBASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NSMCE2Q96MF7 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC136604.1-202ENST00000425471 771 ntBASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AL442647.2-201ENST00000429864 857 ntBASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 KRT18P25-201ENST00000508931 1278 ntBASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC004790.1-201ENST00000612686 536 ntBASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC008761.3-201ENST00000624803 892 ntBASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 AC134684.3-201ENST00000641758 218 ntBASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NSMCE2Q96MF7 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms