Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
CPNE2Q96FN4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.65□□□□□ -0.39
CPNE2Q96FN4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.65□□□□□ -0.39
CPNE2Q96FN4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.65□□□□□ -0.39
CPNE2Q96FN4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.65□□□□□ -0.39
CPNE2Q96FN4 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 KHSRPP1-201ENST00000427983 1768 ntBASIC12.64□□□□□ -0.39
CPNE2Q96FN4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AC138761.1-201ENST00000584393 385 ntBASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AJ011932.1-201ENST00000621707 465 ntBASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.64□□□□□ -0.39
CPNE2Q96FN4 TUBB8P4-201ENST00000511806 1324 ntBASIC12.63□□□□□ -0.39
CPNE2Q96FN4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 PUDPP3-201ENST00000445368 636 ntBASIC12.63□□□□□ -0.39
CPNE2Q96FN4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AC068587.3-201ENST00000526613 355 ntBASIC12.63□□□□□ -0.39
CPNE2Q96FN4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms