Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 AC232323.1-201ENST00000540724 2099 ntBASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 RPSAP12-201ENST00000435879 888 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 PEBP1P3-201ENST00000455475 548 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 CSTP2-201ENST00000610599 398 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC004466.2-201ENST00000614749 516 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC064801.2-201ENST00000625052 1303 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 MYADML-201ENST00000474610 2147 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 AC063926.3-201ENST00000624734 5658 ntBASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRIM43Q96BQ3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AC018442.1-201ENST00000421439 2061 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AL121949.3-201ENST00000406684 385 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AC098657.1-201ENST00000416270 1135 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 ZNF877P-201ENST00000437614 612 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AC010900.1-201ENST00000449849 1296 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 ALG1L15P-201ENST00000482834 794 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AC113385.2-201ENST00000614465 762 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AC020904.3-201ENST00000624199 442 ntBASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.34■□□□□ 0.05
TRIM43Q96BQ3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms