Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-CQ95604 AC103563.1-201ENST00000429316 123 ntBASIC14.65□□□□□ -0.06
HLA-CQ95604 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.65□□□□□ -0.06
HLA-CQ95604 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 AC026616.1-201ENST00000523157 525 ntBASIC14.65□□□□□ -0.06
HLA-CQ95604 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 AC006213.5-201ENST00000619673 288 ntBASIC14.65□□□□□ -0.06
HLA-CQ95604 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC14.65□□□□□ -0.06
HLA-CQ95604 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-CQ95604 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-CQ95604 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-CQ95604 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-CQ95604 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-CQ95604 KRT8P43-201ENST00000406052 1458 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 AL121753.2-201ENST00000624581 1461 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-CQ95604 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-CQ95604 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-CQ95604 ZNF877P-201ENST00000437614 612 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-CQ95604 AC007679.1-201ENST00000458609 502 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-CQ95604 RN7SL523P-201ENST00000484401 298 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-CQ95604 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-CQ95604 AC120498.5-201ENST00000561757 299 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 RN7SL455P-201ENST00000580629 282 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 RN7SL478P-201ENST00000584358 298 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 MIR6893-201ENST00000613458 69 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 AC148476.1-201ENST00000622182 705 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 AL590556.2-202ENST00000636906 844 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 AC126365.1-201ENST00000578585 1514 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-CQ95604 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HLA-CQ95604 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HLA-CQ95604 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HLA-CQ95604 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.64□□□□□ -0.07
HLA-CQ95604 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-CQ95604 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-CQ95604 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HLA-CQ95604 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-CQ95604 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-CQ95604 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HLA-CQ95604 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-CQ95604 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-CQ95604 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-CQ95604 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-CQ95604 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-CQ95604 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-CQ95604 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-CQ95604 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms