Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 KRT18P32-201ENST00000424695 1287 ntBASIC12.74□□□□□ -0.37
AP3S1Q92572 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.74□□□□□ -0.37
AP3S1Q92572 AC079781.3-201ENST00000449110 356 ntBASIC12.74□□□□□ -0.37
AP3S1Q92572 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
AP3S1Q92572 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.74□□□□□ -0.37
AP3S1Q92572 AC040169.1-201ENST00000565382 521 ntBASIC12.74□□□□□ -0.37
AP3S1Q92572 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 SLC25A6P4-201ENST00000586535 553 ntBASIC12.74□□□□□ -0.37
AP3S1Q92572 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 AC012313.10-201ENST00000623509 926 ntBASIC12.74□□□□□ -0.37
AP3S1Q92572 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
AP3S1Q92572 MSNP1-201ENST00000511640 1732 ntBASIC12.74□□□□□ -0.37
AP3S1Q92572 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
AP3S1Q92572 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S1Q92572 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
AP3S1Q92572 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
AP3S1Q92572 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.73□□□□□ -0.37
AP3S1Q92572 AC005237.2-201ENST00000434368 219 ntBASIC12.73□□□□□ -0.37
AP3S1Q92572 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S1Q92572 AC026434.2-201ENST00000506094 1078 ntBASIC12.73□□□□□ -0.37
AP3S1Q92572 GCOM2-201ENST00000509133 1104 ntBASIC12.73□□□□□ -0.37
AP3S1Q92572 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.73□□□□□ -0.37
AP3S1Q92572 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S1Q92572 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.73□□□□□ -0.37
AP3S1Q92572 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
AP3S1Q92572 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.73□□□□□ -0.37
AP3S1Q92572 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S1Q92572 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S1Q92572 AC073862.5-201ENST00000624129 2027 ntBASIC12.72□□□□□ -0.37
AP3S1Q92572 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S1Q92572 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S1Q92572 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms