Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FAM90A12P-201ENST00000519497 2375 ntBASIC15.31■□□□□ 0.04
DDX1Q92499 FAM90A24P-201ENST00000520792 2369 ntBASIC15.31■□□□□ 0.04
DDX1Q92499 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.31■□□□□ 0.04
DDX1Q92499 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.31■□□□□ 0.04
DDX1Q92499 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 AC063926.3-201ENST00000624734 5658 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DDX1Q92499 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DDX1Q92499 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.3■□□□□ 0.04
DDX1Q92499 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.3■□□□□ 0.04
DDX1Q92499 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DDX1Q92499 AC018735.1-201ENST00000437208 1502 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 Z97180.1-201ENST00000445173 988 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 KRT18P15-201ENST00000458108 1291 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.3■□□□□ 0.04
DDX1Q92499 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.3■□□□□ 0.04
DDX1Q92499 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.3■□□□□ 0.04
DDX1Q92499 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.3■□□□□ 0.04
DDX1Q92499 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 AC007952.5-201ENST00000572818 1486 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.3■□□□□ 0.04
DDX1Q92499 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
DDX1Q92499 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.3■□□□□ 0.04
DDX1Q92499 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 AC097724.1-201ENST00000609581 426 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 AP001505.2-201ENST00000616815 443 ntBASIC15.3■□□□□ 0.04
DDX1Q92499 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.3■□□□□ 0.04
DDX1Q92499 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.3■□□□□ 0.04
DDX1Q92499 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DDX1Q92499 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
DDX1Q92499 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DDX1Q92499 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
DDX1Q92499 MYO15B-237ENST00000642007 4893 ntBASIC15.29■□□□□ 0.04
DDX1Q92499 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DDX1Q92499 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 AC004899.1-201ENST00000424687 1714 ntBASIC15.29■□□□□ 0.04
DDX1Q92499 AC018629.1-201ENST00000623381 1736 ntBASIC15.29■□□□□ 0.04
DDX1Q92499 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.29■□□□□ 0.04
DDX1Q92499 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DDX1Q92499 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DDX1Q92499 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.29■□□□□ 0.04
DDX1Q92499 AC092580.1-201ENST00000433998 658 ntBASIC15.29■□□□□ 0.04
DDX1Q92499 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.29■□□□□ 0.04
DDX1Q92499 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.29■□□□□ 0.04
DDX1Q92499 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.29■□□□□ 0.04
DDX1Q92499 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.29■□□□□ 0.04
DDX1Q92499 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.29■□□□□ 0.04
DDX1Q92499 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DDX1Q92499 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms