Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 PLA2G1B-201ENST00000308366 565 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SETD4-202ENST00000399201 1212 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SETD4-203ENST00000399205 1208 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 BPI-202ENST00000417318 1082 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 OR9I2P-201ENST00000427941 903 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC110058.1-201ENST00000530389 563 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 ENSAP2-201ENST00000554405 352 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC010761.4-201ENST00000577325 521 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 LINC00643-207ENST00000637212 734 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 USP4-204ENST00000416417 1536 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC093286.1-201ENST00000514761 656 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 LYPLA1-213ENST00000522007 250 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 PTN-202ENST00000393083 1599 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 KRTAP4-5-201ENST00000343246 879 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 IGHV3OR16-10-201ENST00000425181 350 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MEF2BNBP1-201ENST00000502742 330 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MPI-212ENST00000565576 1148 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC090826.3-201ENST00000611178 834 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 AC007787.2-201ENST00000625100 599 ntBASIC5.55□□□□□ -1.52
SYNE2Q8WXH0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 AC090164.3-201ENST00000610780 2143 ntBASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 USP41-202ENST00000454608 1077 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 KLF17P1-201ENST00000547105 1126 ntBASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 ITGB2-AS1-205ENST00000609694 555 ntTSL 4 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SYNE2Q8WXH0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms