Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 AC007541.1-201ENST00000570282 1469 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 AC098850.1-201ENST00000419919 790 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SERBP1P5-201ENST00000510079 1181 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 AC131206.1-201ENST00000538078 1211 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 AC009486.1-201ENST00000569860 813 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 AL138725.1-201ENST00000407347 1314 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 KRT8P35-201ENST00000483942 1338 ntBASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.78□□□□□ -0.36
DNAAF1Q8NEP3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 AC005014.1-201ENST00000432006 2976 ntBASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
DNAAF1Q8NEP3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 UGT1A2P-201ENST00000454886 866 ntBASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 AC022137.2-201ENST00000503482 481 ntBASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.77□□□□□ -0.37
DNAAF1Q8NEP3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms