Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 CTBP2P3-201ENST00000585629 1255 ntBASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 NUTM2HP-201ENST00000442076 2498 ntBASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
DEPDC4Q8N2C3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AL158070.2-201ENST00000623713 1621 ntBASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 WASH4P-201ENST00000564273 1246 ntBASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 MIR6752-201ENST00000618442 71 ntBASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
DEPDC4Q8N2C3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 AC111170.3-201ENST00000624282 2464 ntBASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 SOCS2P1-201ENST00000417727 557 ntBASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DEPDC4Q8N2C3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms